Insertion junction: CLIP2.039499_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039499
Chromosome:chromosome 1
Location:79366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000500 AXL5,ERR3 Arabinose chain extension enzyme like protein 5; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCTACGCCACCTGGGAGCAGTACGACGCGGAGATTCAGAAGCACG
Internal bar code:GGAGTACATCCAAGTTACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATACTCGCCAATCCAGC
Suggested primer 2:GACGAGTGACCCTGTTCGTT