Insertion junction: CLIP2.039589_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039589
Chromosome:chromosome 12
Location:7721790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGAATCCTCCATCCAAGGCGCAGGCCTTCGTCCACTGCACTTGCGCA
Internal bar code:ACGCGGGGCAAATGGGTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCTGCTCGCCGTTGAA
Suggested primer 2:GGAGCAACTCGCAACACTTG