Gene: Cre12.g554850 (Genome version: v5.5)
Overview
| Common name: | TRX7,TRXh1,TRXh2 |
| Defline: | Thioredoxin h2, cytosolic |
| Description: | Thioredoxin h2, cytosolic, splicing variant b. This is the second longest of three splicing variants differing on 3\' end. This variant contains an intron in the 3\'UTR. Deduced protein similar to splicing variant a. The protein corresponds to the sequence |
| Synonyms: | g13437.t1,Cre12.g554850.t1.1,TRX7,TRXh2 |
| Chromosome: | chromosome_12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2C07
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
shapes in cytoplasm/a few medium crescent structures in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.053337_1 | LMJ.RY0402.053337 | sense | intron | 95 |
| LMJ.RY0402.053337_2 | LMJ.RY0402.053337 | sense | intron | 95 |
| LMJ.RY0402.060976_1 | LMJ.RY0402.060976 | antisense | 3'UTR | 95 |
| LMJ.RY0402.060976_2 | LMJ.RY0402.060976 | antisense | 3'UTR | 95 |
| LMJ.RY0402.087201_1 | LMJ.RY0402.087201 | antisense | 3'UTR | 58 |
| LMJ.RY0402.095137_3 | LMJ.RY0402.095137 | sense | 3'UTR | 73 |
| LMJ.RY0402.116374_1 | LMJ.RY0402.116374 | sense | intron | 58 |
| LMJ.RY0402.117370_1 | LMJ.RY0402.117370 | sense | intron | 95 |
| LMJ.RY0402.117370_2 | LMJ.RY0402.117370 | sense | intron | 95 |
| LMJ.RY0402.143057_2 | LMJ.RY0402.143057 | sense | CDS | 95 |
| LMJ.RY0402.143057_3 | LMJ.RY0402.143057 | sense | CDS | 95 |
| LMJ.RY0402.173910_1 | LMJ.RY0402.173910 | antisense | 3'UTR | 73 |
| LMJ.RY0402.192315_2 | LMJ.RY0402.192315 | antisense | 5'UTR | 95 |
| LMJ.RY0402.231941_1 | LMJ.RY0402.231941 | antisense | 3'UTR | 73 |
| LMJ.RY0402.256206_3 | LMJ.RY0402.256206 | antisense | 5'UTR | 95 |
Gene Annotations
| PFAM: | PF00085 |
| PANTHER: | PTHR10438:SF16 PTHR10438 |
| KEGG_ec: | |
| KEGG_orthology: | K03671 |
| KOG: | KOG0907 |
| Gene ontology terms:: | GO:0045454, GO:0006662, GO:0009055, GO:0015035 |
| Best arabidopsis TAIR name: | AT3G51030.1 |
| Best arabidopsis TAIR symbol: | ATTRX H1,ATTRX1,TRX1 |
| Best arabidopsis TAIR defline: | thioredoxin H-type 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.
Gene: Cre12.g554850 (Genome version: v5.3)
Overview
| Common name: | |
| Defline: | Thioredoxin h2, cytosolic |
| Description: | |
| Synonyms: | g13437,Cre12.g554850 |
| Chromosome: | chromosome_12 |
Protein Localization
We did not create a plasmid for this gene.
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.SG0182.002789_1 | LMJ.SG0182.002789 | antisense | 3'UTR | 75 |
Gene Annotations
| PFAM: | PF00085 |
| PANTHER: | PTHR10438:SF16 PTHR10438 |
| KEGG_ec: | |
| KEGG_orthology: | K03671 |
| KOG: | KOG0907 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G51030.1 |
| Best arabidopsis TAIR symbol: | ATTRX H1,ATTRX1,TRX1 |
| Best arabidopsis TAIR defline: | thioredoxin H-type 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.