Gene: Cre12.g554850

Overview

Common name:TRXH2,TRX7,TRXh2,TRXh2a
Defline:(1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic
Description:There are three splicing variants differing on 3' end, one containing an intron in the 3'UTR. The sequenced cDNA (AY184797) derived from strain C9 (obtained from Kazusa DNA research institute) shows 2 amino acid substitutions in the protein sequence compared to AY184797, one of which alters the active site from WCGPC to WCGAC.
Synonyms:g13437.t1,TRXh2,TRXh2a,Cre12.g554850.t1.1,TRX7
Chromosome:chromosome 12

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC2C07

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

cytosol/cytosol (strong signal)

nucleus/nucleoplasm

shapes in cytoplasm/a few medium crescent structures in cytoplasm

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.004047_1 CLIP2.004047 3'UTR 80 6.1
CLIP2.004047_2 CLIP2.004047 3'UTR 80 6.1
CLIP2.004669_3 CLIP2.004669 5'UTR 80 6.1
CLIP2.005292_1 CLIP2.005292 3'UTR 80 6.1
CLIP2.006692_1 CLIP2.006692 intron 40 6.1
CLIP2.007083_1 CLIP2.007083 3'UTR 80 6.1
CLIP2.007083_2 CLIP2.007083 3'UTR 80 6.1
CLIP2.026294_3 CLIP2.026294 CDS 80 6.1
CLIP2.026294_4 CLIP2.026294 CDS 80 6.1
CLIP2.035783_1 CLIP2.035783 intron 80 6.1
CLIP2.035783_2 CLIP2.035783 intron 80 6.1
CLIP2.039589_1 CLIP2.039589 intron 80 6.1
CLIP2.039589_2 CLIP2.039589 intron 80 6.1
CLIP2.039622_1 CLIP2.039622 intron 80 6.1
CLIP2.039622_2 CLIP2.039622 intron 80 6.1
CLIP2.045600_1 CLIP2.045600 CDS 80 6.1
CLIP2.045600_2 CLIP2.045600 CDS 80 6.1
CLIP2.053238_1 CLIP2.053238 intron 80 6.1
CLIP2.053238_2 CLIP2.053238 intron 80 6.1
CLIP2.056883_2 CLIP2.056883 5'UTR 80 6.1
CLIP2.056883_3 CLIP2.056883 5'UTR 80 6.1
LMJ.RY0402.053337_1 LMJ.RY0402.053337 intron 95 5.5
LMJ.RY0402.053337_2 LMJ.RY0402.053337 intron 95 5.5
LMJ.RY0402.060976_1 LMJ.RY0402.060976 3'UTR 95 5.5
LMJ.RY0402.060976_2 LMJ.RY0402.060976 3'UTR 95 5.5
LMJ.RY0402.087201_1 LMJ.RY0402.087201 3'UTR 58 5.5
LMJ.RY0402.095137_3 LMJ.RY0402.095137 3'UTR 73 5.5
LMJ.RY0402.116374_1 LMJ.RY0402.116374 intron 58 5.5
LMJ.RY0402.117370_1 LMJ.RY0402.117370 intron 95 5.5
LMJ.RY0402.117370_2 LMJ.RY0402.117370 intron 95 5.5
LMJ.RY0402.143057_2 LMJ.RY0402.143057 CDS 95 5.5
LMJ.RY0402.143057_3 LMJ.RY0402.143057 CDS 95 5.5
LMJ.RY0402.173910_1 LMJ.RY0402.173910 3'UTR 73 5.5
LMJ.RY0402.192315_2 LMJ.RY0402.192315 5'UTR 95 5.5
LMJ.RY0402.231941_1 LMJ.RY0402.231941 3'UTR 73 5.5
LMJ.RY0402.256206_3 LMJ.RY0402.256206 5'UTR 95 5.5
LMJ.SG0182.002789_1 LMJ.SG0182.002789 3'UTR 75 5.3

Gene Annotations

PFAM:PF00085
PANTHER: PTHR10438
KEGG_ec:EC:1.6.5.4
KEGG_orthology:K03671
KOG:KOG0907
Gene ontology terms::GO:0006662, GO:0015035, GO:0045454
Best arabidopsis TAIR name:AT3G51030.1
Best arabidopsis TAIR symbol:ATTRX H1,ATTRX1,TRX1
Best arabidopsis TAIR defline:thioredoxin H-type 1
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.