Insertion junction: CLIP2.045600_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045600
Chromosome:chromosome 12
Location:7721716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCGGCGTGAGGGGAAGCAGCGGGTGCAACAGCACAGAAGGCTTGG
Internal bar code:ACAGGCTCTCGTAGAGGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:82.8125
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAACTCGCAACACTTG
Suggested primer 2:AATACCTGCTCGCCGTTGAA