Insertion junction: CLIP2.039622_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039622
Chromosome:chromosome 12
Location:7721790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGAATCCTCCATCCAAGGCGCAGGCCTTCGTCCACTGCACTTGCGCA
Internal bar code:GCCCCGATCAGCGGTTACTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCTGCTCGCCGTTGAA
Suggested primer 2:GGAGCAACTCGCAACACTTG