Insertion junction: CLIP2.045600_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045600
Chromosome:chromosome 12
Location:7721733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCCGCTCTAGTGAGTAACGCCGCAGCGAGGCTCGGCGCAGGATGCG
Internal bar code:CATACTTTTTTCAGGAGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCTGCTCGCCGTTGAA
Suggested primer 2:GGAGCAACTCGCAACACTTG