Insertion junction: CLIP2.039589_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039589
Chromosome:chromosome 12
Location:7721791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCGGCGCATCCTGCGCCGAGCCTCGCTGCGGCGTTACTCACTAGAG
Internal bar code:ACGCGGGGCAAATGGGTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAACTCGCAACACTTG
Suggested primer 2:AATACCTGCTCGCCGTTGAA