Insertion junction: CLIP2.056883_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056883
Chromosome:chromosome 12
Location:7720941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554850 TRXH2,TRX7,TRXh2,TRXh2a (1 of 9) K03671 - thioredoxin 1 (trxA); Thioredoxin h2, cytosolic 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGGCTATCATCGCTTATACCGCTGTCACATTTCCATACTGTGTAGTC
Internal bar code:GAAGTGAGGATTGACCGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTAAGTTTGCGACGCT
Suggested primer 2:GCCCACTTTTCCCTTGCAAG