Insertion junction: CLIP2.039609_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039609
Chromosome:chromosome 2
Location:3960118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102350 ATG3,APG3 Autophagy-related protein; (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGGTCAAGGCGGGATCCTATCCATGGAAATCCCCTCGACCCAGACCA
Internal bar code:CCGGTTTAGCCCGAGAGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2586
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTGCAAGTATCCTGGC
Suggested primer 2:GGGTGCGCATAATGTTGTCC