Insertion junction: CLIP2.039837_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039837
Chromosome:chromosome 10
Location:3534769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445000 SLT2 Sodium/sulfate co-transporter 2; (1 of 2) PF00939//PF02080 - Sodium:sulfate symporter transmembrane region (Na_sulph_symp) // TrkA-C domain (TrkA_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGATAGATGCCGCTGACACTGAAACCGGATTGCTGCAGCAGGCCCGAG
Internal bar code:AAAAACGTACTGGTGGAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4856
LEAP-Seq percent confirming:94.5545
LEAP-Seq n confirming:191
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:202

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCAGTGGCTGAAAGTG
Suggested primer 2:GCTCCTCATCGTAGAACGGG