Insertion junction: CLIP2.040332_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040332
Chromosome:chromosome 14
Location:3779953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632050 POB25,RPG1,RPGRIP1 Retinitis pigmentosa GTPase regulator-interacting protein 1; (1 of 1) PF11618 - First C2 domain of RPGR-interacting protein 1 (C2-C2_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGGGGGCCAGCCCCGACACAGCGCAGTGAGCAGGAAGTCGGGCAGG
Internal bar code:TGAGTGTCAGTCAAAATCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGTTCTGGCACAACGA
Suggested primer 2:CCTCGATGTTCTTGCCCACT