Insertion junction: CLIP2.040337_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040337
Chromosome:chromosome 3
Location:4121582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172650 BLD2,TUE1 (1 of 1) K10391 - tubulin epsilon (TUBE); Epsilon tubulin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCAAGCCTGGTCCCGTTCTGTGCATCATGTTGCTGGTACCCATCGC
Internal bar code:GTCAGGAACTGCGCGGCACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3047
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGATCCATGTACTGCTC
Suggested primer 2:CTCAACGTGGACCTCAACGA