Insertion junction: CLIP2.040406_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040406
Chromosome:chromosome 3
Location:4619852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTAAAAGTGCGGCGAACGCCACGCCCTAACGCACCATGGCCATGCTG
Internal bar code:ACCCGGGGGCGAGAGGTTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATATTACTGCGGGCGACAGG
Suggested primer 2:GGTGGGGTAGTCCAAAGCTC