Insertion junction: CLIP2.040469_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040469
Chromosome:chromosome 7
Location:3498386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGGAATGTGGTGGGGTTTCCATGCATGAGTAATTATGAGTTCAGAAC
Internal bar code:TTGTGCGGTTTAAACGTCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:37.7358
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGTCACACCGTCTCATT
Suggested primer 2:ACGTCAACCTATAGGCCCCT