Insertion junction: CLIP2.040481_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040481
Chromosome:chromosome 1
Location:4039383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTCATGTGTGACGTCAATCTCTGCTCTTCACTCCCCTGCTTGCAGG
Internal bar code:TATTCTAGCTACTGGTGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3946
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAGTCCAGGACCAGAC
Suggested primer 2:CACTGGTCAGGTGCCTAAGG