Insertion junction: CLIP2.040589_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040589
Chromosome:chromosome 10
Location:1444553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428100 TMG5 (1 of 1) PTHR10631//PTHR10631:SF2 - N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE // N2, N2-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASES-LIKE PROTEIN; possible N2,N2-dimethylguanosine tRNA methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCACCAGGCCGTCCGCCGGTCAGTCACCTGTACGGCGACACTCACCA
Internal bar code:CTTCTGTTTGTTTGCAGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGACTTGCATGAAGCCAT
Suggested primer 2:GATTCCTCATCGCTCCCAGG