Insertion junction: CLIP2.040743_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040743
Chromosome:chromosome 17
Location:4478713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731001 (1 of 96) IPR019734 - Tetratricopeptide repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACGCAGGGGTAGCCGCTCCCGTCCCTGCCAGCAGTCCCAACAAGA
Internal bar code:TTTAGTGATTCAATTGGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3978
LEAP-Seq percent confirming:56.0976
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACTGATACCCCGTTGGC
Suggested primer 2:AGGTGACCATGACCATGCAG