Insertion junction: CLIP2.040796_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040796
Chromosome:chromosome 10
Location:4782365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452900 SMY2 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase; Sphingomyelin phosphodiesterase/sphingomylinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTGCCATTATCATCCTTGTGTTCTCACCCCCATGCCGCACCCACCTG
Internal bar code:GTTATCGCTAAAGGCATGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2260
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATATAGAACCGCCACGA
Suggested primer 2:CTAAATCGCACGGCCTTTCG