Gene: Cre10.g452900

Overview

Common name:SMY2
Defline:(1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase; Sphingomyelin phosphodiesterase/sphingomylinase
Description:
Synonyms:SMY2,g11122.t1,Cre10.g452900.t1.1
Chromosome:chromosome 10

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.021941_1 CLIP2.021941 intron 80 6.1
CLIP2.021941_2 CLIP2.021941 intron 80 6.1
CLIP2.024652_1 CLIP2.024652 intron 80 6.1
CLIP2.024652_2 CLIP2.024652 intron 80 6.1
CLIP2.036528_1 CLIP2.036528 3'UTR 80 6.1
CLIP2.036528_2 CLIP2.036528 3'UTR 80 6.1
CLIP2.040796_1 CLIP2.040796 intron 80 6.1
CLIP2.040796_2 CLIP2.040796 intron 80 6.1
CLIP2.046142_1 CLIP2.046142 intron 80 6.1
CLIP2.046142_2 CLIP2.046142 intron 80 6.1
CLIP2.048028_1 CLIP2.048028 intron 80 6.1
CLIP2.048028_2 CLIP2.048028 intron 80 6.1
LMJ.RY0402.072523_3 LMJ.RY0402.072523 intron 73 5.5
LMJ.RY0402.079042_1 LMJ.RY0402.079042 intron 73 5.5
LMJ.RY0402.130476_1 LMJ.RY0402.130476 3'UTR 73 5.5
LMJ.RY0402.134794_1 LMJ.RY0402.134794 CDS 95 5.5
LMJ.RY0402.134794_2 LMJ.RY0402.134794 CDS 95 5.5
LMJ.RY0402.142812_2 LMJ.RY0402.142812 3'UTR 58 5.5
LMJ.RY0402.167187_1 LMJ.RY0402.167187 3'UTR 73 5.5
LMJ.RY0402.198426_1 LMJ.RY0402.198426 intron 95 5.5
LMJ.RY0402.198426_2 LMJ.RY0402.198426 intron 95 5.5
LMJ.RY0402.198894_1 LMJ.RY0402.198894 3'UTR 95 5.5
LMJ.RY0402.198894_2 LMJ.RY0402.198894 3'UTR/CDS 95 5.5
LMJ.RY0402.242634_1 LMJ.RY0402.242634 CDS 73 5.5

Gene Annotations

PFAM:PF03372
PANTHER: PTHR12393
KEGG_ec:EC:3.1.4.12
KEGG_orthology:K12351
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Caffeine, screen 2 of 2 ( 87% confidence (FDR = 0.13))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.