Insertion junction: CLIP2.048028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048028
Chromosome:chromosome 10
Location:4782506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452900 SMY2 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase; Sphingomyelin phosphodiesterase/sphingomylinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAACCTTTTCCTGTTTCCCCATCTACGCCCCAAGTCTCCGCAGGCTT
Internal bar code:GACATCCTATTTATAGACGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1865
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCACTTTGACGGCTGCT
Suggested primer 2:CTAAATCGCACGGCCTTTCG