Insertion junction: CLIP2.048028_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048028
Chromosome:chromosome 10
Location:4782508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452900 SMY2 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase; Sphingomyelin phosphodiesterase/sphingomylinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGATGCTAACCCGGAGAGGTGGGTGTTGCGGGATTGAGCCGCGCGGTG
Internal bar code:AGGTACGTAGTTGTTTCCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAATCGCACGGCCTTTCG
Suggested primer 2:TCATCACTTTGACGGCTGCT