Insertion junction: CLIP2.046142_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046142
Chromosome:chromosome 10
Location:4781555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452900 SMY2 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase; Sphingomyelin phosphodiesterase/sphingomylinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTACGCGTACCATGTGGCCCTCACCTTGACGTCAGGCAGCTGCTCAT
Internal bar code:CTCCCGCGTTTAGATTCAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1404
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCGTCAAAGTGATGA
Suggested primer 2:CTATGGTCCGGAGCCTTCAC