Insertion junction: CLIP2.041082_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041082
Chromosome:chromosome 12
Location:4881974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523850 MPPB,QCR1 (1 of 1) K17732 - mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] (PMPCB, MAS1); Ubiquinol:cytochrome c oxidoreductase 50 kDa core 1 subunit 3'UTR
Cre12.g801416 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCCGCCGCCGTCCCCTTGGCGCCCACCTGAGATGTCCTCGGCCGCA
Internal bar code:TGTATGTAGCTGTATGGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGGGTGTGGTACGG
Suggested primer 2:AAGGGCGAGGTAGGAGATGT