Insertion junction: CLIP2.041183_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041183
Chromosome:chromosome 2
Location:7954874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145300 (1 of 1) K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGCGGAGGCGGAACCCGATCTTGACGAGATCCCGCCCACACAGCT
Internal bar code:GATTCATCTGACTGGCAAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2217
LEAP-Seq percent confirming:56.044
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGACAGGGCTCTCAAT
Suggested primer 2:ACACACGTGTATGGCGGAAT