Insertion junction: CLIP2.041776_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041776
Chromosome:chromosome 16
Location:3844535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688750 (1 of 1) K13109 - IK cytokine (IK, RED, RER) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCACTGGCAGCGGGGTGCTAGCCTCCTGGGGAAGGACAGTAAGGAGGA
Internal bar code:TGTAACGGTGGTTCCAAATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2665
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAGCATGTGTGTACGCG
Suggested primer 2:ATGCGACGATACTGCTGAGG