Insertion junction: CLIP2.041868_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041868
Chromosome:chromosome 7
Location:2961387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332950 SFA,SFA1 (1 of 1) PF06705 - SF-assemblin/beta giardin (SF-assemblin); SF-assemblin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAGCGAGCCTGCACAGATTTTTGATGTGACGGGGTAGTGTGACATGG
Internal bar code:GTCATCCTATGTGGAGAACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1954
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACGGGCATAAAAACGG
Suggested primer 2:CACGCGCTTTAGCCTTCTTC