Gene: Cre07.g332950
Overview
| Common name: | SFA,SFA1 |
| Defline: | (1 of 1) PF06705 - SF-assemblin/beta giardin (SF-assemblin); SF-assemblin |
| Description: | Found in basal body proteome as SF-assemblin; SF-assemblin has been identified as the filament-forming component of the striated microtubule-associated fibers (distal striated fiber) connecting the basal bodies [GI:15528533] |
| Synonyms: | SFA,SFA1,Cre07.g332950.t1.1,g7745.t1 |
| Chromosome: | chromosome 7 |
Protein Localization
A plasmid for expressing Cre07.g332950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g332950-Venus-3xFLAG
Imaged strain: CSI_LW05D5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
centrosome or flagella/base of flagella
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.021599_1 | CLIP2.021599 | intron | 80 | 6.1 |
| CLIP2.021599_2 | CLIP2.021599 | intron | 80 | 6.1 |
| CLIP2.037932_1 | CLIP2.037932 | intron | 80 | 6.1 |
| CLIP2.037932_2 | CLIP2.037932 | intron | 80 | 6.1 |
| CLIP2.041868_1 | CLIP2.041868 | intron | 80 | 6.1 |
| CLIP2.041868_2 | CLIP2.041868 | intron | 80 | 6.1 |
| LMJ.RY0402.132552_1 | LMJ.RY0402.132552 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.184317_1 | LMJ.RY0402.184317 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.219570_1 | LMJ.RY0402.219570 | CDS | 95 | 5.5 |
| LMJ.RY0402.219570_2 | LMJ.RY0402.219570 | CDS | 95 | 5.5 |
Gene Annotations
| PFAM: | PF06705 |
| PANTHER: | PTHR40412 PTHR40412:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005200 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.