Insertion junction: CLIP2.041882_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041882
Chromosome:chromosome 5
Location:570145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244701 (1 of 1) IPR028974 - TSP type-3 repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCATGGCAGGCGTGCGAGGCAAACTCGTACATCTACCCTTGCACAA
Internal bar code:TGAGGTTATCGTGGGAATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCATCATCCCCAATCGA
Suggested primer 2:TTCTAGCGATCCAATCCGGC