| Common name: | |
| Defline: | (1 of 1) IPR028974 - TSP type-3 repeat |
| Description: | |
| Synonyms: | g5241.t1 |
| Chromosome: | chromosome 5 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.041882_1 | CLIP2.041882 | CDS | 80 | 6.1 |
| CLIP2.055856_1 | CLIP2.055856 | intron | 80 | 6.1 |
| LMJ.RY0402.069868_1 | LMJ.RY0402.069868 | CDS | 58 | 5.5 |
| LMJ.RY0402.077434_1 | LMJ.RY0402.077434 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.077434_2 | LMJ.RY0402.077434 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.167364_1 | LMJ.RY0402.167364 | CDS | 58 | 5.5 |
| LMJ.RY0402.167364_2 | LMJ.RY0402.167364 | CDS | 58 | 5.5 |
| LMJ.RY0402.171320_1 | LMJ.RY0402.171320 | intron | 73 | 5.5 |
| LMJ.RY0402.187320_1 | LMJ.RY0402.187320 | 5'UTR | 73 | 5.5 |
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | EC:2.7.11.1 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005509 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Paromomycin, screen 1 of 6 ( 90% confidence (FDR = 0.1)) |
| Paromomycin, screen 3 of 6 ( 71% confidence (FDR = 0.29)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.