Insertion junction: CLIP2.042004_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042004
Chromosome:chromosome 12
Location:4668604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522400 (1 of 1) PTHR10641:SF538 - LD18233P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGCACGACCACGCCGTGCCCAGCTCCTCATACAGCCGCTGCAGCAG
Internal bar code:TTTTGTCCTTGACTAGGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGCAGGCAATTTACGGC
Suggested primer 2:GAACATGCTGAGCTCATGCG