Insertion junction: CLIP2.042015_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042015
Chromosome:chromosome 7
Location:5258639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349500 (1 of 2) PTHR15574:SF40 - WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACCGCTTCCTGCTGACGCGGCCCGCCCGCTGCATCCTGCTGCGTCC
Internal bar code:CCTTTACTATAACCAGTGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3705
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGATGAGGATGCAGGCT
Suggested primer 2:CTCCGACCCCAACAGCAAT