Insertion junction: CLIP2.042078_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042078
Chromosome:chromosome 2
Location:3867751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101400 CHC1,NSG15 Clathrin Heavy Chain; (1 of 1) K04646 - clathrin heavy chain (CLTC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCGATTTGCCGATTCCGCGCTACCCCCCGGCGCACCTGGTCGAAGTT
Internal bar code:TAATAGTCAACAAGCAAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCGGTGGAGCTGTTTGT
Suggested primer 2:GGGGGATTGATGAAGTGCCA