Insertion junction: CLIP2.042390_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042390
Chromosome:chromosome 11
Location:370756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467579 CSC6 Chlamydomonadale-specific family C protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTCTGAAGTGCAGCTGCAGCGGGCGTACCTGCTCAAGGTGGTGCCGCT
Internal bar code:TGTAGCATACTCGCAAAACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCACTGCTGCTGAGAATC
Suggested primer 2:GATTCTGGCACCTGCTCCTT