Insertion junction: CLIP2.042585_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042585
Chromosome:chromosome 14
Location:535419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611450 PLP7,PLAP7 Plastid lipid associated protein 7; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCTCGTCCAGTGCCGGCGGCTCGTCAACGGACGCAAGCACGACGGCG
Internal bar code:AAGATGCGGTTGTAGTATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4522
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTAAGGCGTCGACTGAGA
Suggested primer 2:CTCCCCTTAGTTCTGGCTGC