Insertion junction: CLIP2.042633_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042633
Chromosome:chromosome 3
Location:4068749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172100 PDF1A Peptide deformylase; (1 of 1) PTHR10458//PTHR10458:SF11 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCCTGAAGGGAGCCTGCATGTGGAGCTCTACAGCCTGATAGTCGCCT
Internal bar code:CACTGGCACGGGATGTACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1804
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGACGGCTGTTGAGAG
Suggested primer 2:ATGAGGGAAGAGAGGGGGTC