| Common name: | PDF1A |
| Defline: | Peptide deformylase; (1 of 1) PTHR10458//PTHR10458:SF11 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE, MITOCHONDRIAL |
| Description: | Polypeptide deformylase,removes formyl group from initiator Met; predicted mitochondrion-targetted |
| Synonyms: | g3547.t1,Cre03.g172100.t1.1 |
| Chromosome: | chromosome 3 |
A plasmid for expressing Cre03.g172100 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g172100-Venus-3xFLAG
No localization data is available in our datasets for this protein.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.029481_1 | CLIP2.029481 | intron | 80 | 6.1 |
| CLIP2.037560_1 | CLIP2.037560 | CDS | 80 | 6.1 |
| CLIP2.037560_2 | CLIP2.037560 | CDS | 80 | 6.1 |
| CLIP2.042633_1 | CLIP2.042633 | intron | 80 | 6.1 |
| CLIP2.042633_2 | CLIP2.042633 | intron | 80 | 6.1 |
| CLIP2.043399_1 | CLIP2.043399 | CDS | 80 | 6.1 |
| CLIP2.044428_1 | CLIP2.044428 | CDS | 80 | 6.1 |
| CLIP2.044428_2 | CLIP2.044428 | CDS | 80 | 6.1 |
| CLIP2.048806_1 | CLIP2.048806 | intron | 80 | 6.1 |
| CLIP2.051400_1 | CLIP2.051400 | intron | 80 | 6.1 |
| CLIP2.057583_1 | CLIP2.057583 | 3'UTR | 80 | 6.1 |
| CLIP2.057583_2 | CLIP2.057583 | 3'UTR | 80 | 6.1 |
| CLIP2.067257_1 | CLIP2.067257 | 5'UTR | 80 | 6.1 |
| CLIP2.067257_2 | CLIP2.067257 | 5'UTR | 80 | 6.1 |
| CLIP2.076160_1 | CLIP2.076160 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.136248_1 | LMJ.RY0402.136248 | intron | 73 | 5.5 |
| LMJ.RY0402.136248_2 | LMJ.RY0402.136248 | intron | 58 | 5.5 |
| PFAM: | PF01327 |
| PANTHER: | PTHR10458 PTHR10458:SF11 |
| KEGG_ec: | EC:3.5.1.88 |
| KEGG_orthology: | K01462 |
| KOG: | |
| Gene ontology terms:: | GO:0005506, GO:0042586 |
| Best arabidopsis TAIR name: | AT1G15390 |
| Best arabidopsis TAIR symbol: | ATDEF1,PDF1A |
| Best arabidopsis TAIR defline: | peptide deformylase 1A |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.