Insertion junction: CLIP2.044428_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044428
Chromosome:chromosome 3
Location:4067728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172100 PDF1A Peptide deformylase; (1 of 1) PTHR10458//PTHR10458:SF11 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACAGATTGGCGAACCCTGGCGGGTGGGTGGTGTAGACGATAAGGAA
Internal bar code:AATGGGTTGTCATAGCAGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCCCTCTCTTCCCTCAT
Suggested primer 2:TGGCATCGAAAATCCACGGA