Insertion junction: CLIP2.048806_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048806
Chromosome:chromosome 3
Location:4068824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172100 PDF1A Peptide deformylase; (1 of 1) PTHR10458//PTHR10458:SF11 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGTAAGTCGCGCGTGTGTGTTTATTCCTTGCAGGGCGCTGCCAGGCG
Internal bar code:TTCCCCATAGGGCTTTGAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1723
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGACGGCTGTTGAGAG
Suggested primer 2:ATGAGGGAAGAGAGGGGGTC