Insertion junction: CLIP2.057583_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057583
Chromosome:chromosome 3
Location:4069155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172100 PDF1A Peptide deformylase; (1 of 1) PTHR10458//PTHR10458:SF11 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE, MITOCHONDRIAL 3'UTR
Cre03.g172150 (1 of 1) PTHR10663//PTHR10663:SF182 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR // SH2 DOMAIN-CONTAINING PROTEIN 5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCTGTTGCCTTGGCGCAGAATGCTTTCATGAGCTAATGAAGAGGCTT
Internal bar code:TTTGCACATGGTTTATCCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GACCATTTGACGGTATGCGC
Suggested primer 2:TATGAGCCTGAAGGGAGCCT