Insertion junction: CLIP2.042852_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042852
Chromosome:chromosome 13
Location:2714357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581801 (1 of 1) PTHR13198//PTHR13198:SF4 - RING FINGER PROTEIN 25 // E3 UBIQUITIN-PROTEIN LIGASE RNF25 intron
Cre13.g581850 (1 of 1) PTHR10566//PTHR10566:SF53 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCTGCAGCTCCCTGTGATCGACACCAGGCATGGTAACTGGTGATGAG
Internal bar code:TTAGCATTCCCCCTTTAAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGTGCAAACAGTTTACG
Suggested primer 2:GGTCATGGTCATGGTGGCA