Gene: Cre13.g581850

Overview

Common name:
Defline:	(1 of 1) PTHR10566//PTHR10566:SF53 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // SUBFAMILY NOT NAMED
Description:
Synonyms:	g14288.t1,Cre13.g581850.t1.1
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.000066_1	CLIP2.000066	intron	80	6.1
CLIP2.000066_2	CLIP2.000066	intron	80	6.1
CLIP2.000184_1	CLIP2.000184	intron	80	6.1
CLIP2.000416_1	CLIP2.000416	5'UTR	80	6.1
CLIP2.000416_2	CLIP2.000416	5'UTR	80	6.1
CLIP2.000503_1	CLIP2.000503	3'UTR	80	6.1
CLIP2.000503_2	CLIP2.000503	3'UTR	80	6.1
CLIP2.000503_3	CLIP2.000503	3'UTR	63	6.1
CLIP2.000526_1	CLIP2.000526	intron	80	6.1
CLIP2.000526_2	CLIP2.000526	intron	80	6.1
CLIP2.000579_1	CLIP2.000579	CDS	80	6.1
CLIP2.000770_1	CLIP2.000770	intron	80	6.1
CLIP2.000770_2	CLIP2.000770	intron	80	6.1
CLIP2.042852_1	CLIP2.042852	3'UTR	80	6.1
CLIP2.042852_2	CLIP2.042852	3'UTR	80	6.1
LMJ.RY0402.048843_1	LMJ.RY0402.048843	CDS	95	5.5
LMJ.RY0402.048843_2	LMJ.RY0402.048843	CDS	95	5.5
LMJ.RY0402.071727_1	LMJ.RY0402.071727	intron	73	5.5
LMJ.RY0402.095289_1	LMJ.RY0402.095289	CDS	73	5.5
LMJ.RY0402.120034_1	LMJ.RY0402.120034	intron	73	5.5
LMJ.RY0402.123075_1	LMJ.RY0402.123075	3'UTR	95	5.5
LMJ.RY0402.123075_2	LMJ.RY0402.123075	3'UTR	95	5.5
LMJ.RY0402.139731_1	LMJ.RY0402.139731	intron	58	5.5
LMJ.RY0402.146266_2	LMJ.RY0402.146266	CDS	73	5.5
LMJ.RY0402.160812_1	LMJ.RY0402.160812	intron	95	5.5
LMJ.RY0402.160812_2	LMJ.RY0402.160812	intron	95	5.5
LMJ.RY0402.169666_1	LMJ.RY0402.169666	CDS	95	5.5
LMJ.RY0402.169666_2	LMJ.RY0402.169666	intron	95	5.5
LMJ.RY0402.193282_2	LMJ.RY0402.193282	CDS	73	5.5
LMJ.RY0402.193282_3	LMJ.RY0402.193282	CDS	58	5.5
LMJ.RY0402.197443_1	LMJ.RY0402.197443	3'UTR	73	5.5
LMJ.RY0402.205297_1	LMJ.RY0402.205297	intron	95	5.5
LMJ.RY0402.205297_2	LMJ.RY0402.205297	intron	95	5.5
LMJ.RY0402.218424_1	LMJ.RY0402.218424	CDS	73	5.5
LMJ.RY0402.233992_1	LMJ.RY0402.233992	3'UTR	95	5.5
LMJ.RY0402.233992_2	LMJ.RY0402.233992	3'UTR	95	5.5
LMJ.RY0402.240325_1	LMJ.RY0402.240325	intron	73	5.5

Gene Annotations

PFAM:	PF03109
PANTHER:	PTHR10566 PTHR10566:SF53
KEGG_ec:	EC:3.6.3.46
KEGG_orthology:
KOG:	KOG1235
Gene ontology terms::	GO:0004672, GO:0005524, GO:0006468
Best arabidopsis TAIR name:	AT4G31390
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Protein kinase superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 3 of 11 ( 88% confidence (FDR = 0.12))

Carbon concentrating mechanism, screen 5 of 11 ( 95% confidence (FDR = 0.044))

Carbon concentrating mechanism, screen 6 of 11 ( 94% confidence (FDR = 0.058))

Carbon concentrating mechanism, screen 8 of 11 ( 99% confidence (FDR = 0.005))

Carbon concentrating mechanism, screen 9 of 11 ( 85% confidence (FDR = 0.15))

Carbon concentrating mechanism, screen 11 of 11 ( 73% confidence (FDR = 0.27))

LAT004F06, screen 1 of 1 ( 94% confidence (FDR = 0.057))

LAT040A06, screen 1 of 1 ( 98% confidence (FDR = 0.013))

LAT042C03, screen 1 of 1 ( 99% confidence (FDR = 0.0099))

Photosynthesis, screen 3 of 5 ( 89% confidence (FDR = 0.11))

Photosynthesis, screen 5 of 5 ( 78% confidence (FDR = 0.22))

Rose Bengal, screen 3 of 4 ( 99% confidence (FDR = 0.0083))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.