Insertion junction: CLIP2.043157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043157
Chromosome:chromosome 6
Location:3101065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCCGTTAGCGTGCGGCTGCGCGTGCGTTGGCACGCTAGTGCCGCTG
Internal bar code:TTTTCATTTGCTCCAGTTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2594
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGTGAGCGGAATCAAC
Suggested primer 2:ATGGTGTGCGTTTGTGTGTG