Insertion junction: CLIP2.043247_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043247
Chromosome:chromosome 17
Location:2948366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAAGAGGGGGGATGGGGCCATCCCTCGCTCCCTCATACGCCCACGCA
Internal bar code:GTGTGCGGTTCTGTTAGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACCTCCTGACTACCAC
Suggested primer 2:CCCGCCTCGCTCTATTGAAT