Insertion junction: CLIP2.043438_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043438
Chromosome:chromosome 13
Location:341828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564350 ATM1 (1 of 1) K04728 - ataxia telangiectasia mutated family protein (ATM, TEL1); Ataxia telangiectasia mutated protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGCTTCCTCCCGCGGCTGTGGCCGGGTCAGTATGCTGTTCCTTGG
Internal bar code:AGGGTCAGCCAAAAACTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:773
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACCACCACTCTTATGT
Suggested primer 2:CAACACCCAACACCCAACAC