Gene: Cre13.g564350

Overview

Common name:	ATM1
Defline:	(1 of 1) K04728 - ataxia telangiectasia mutated family protein (ATM, TEL1); Ataxia telangiectasia mutated protein 1
Description:	Found in basal body proteome as ATM; Orthologous to ataxia-telangiectasia mutated (ATM) gene in Arabidopsis
Synonyms:	g13884.t1,Cre13.g564350.t1.1
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.020423_1	CLIP2.020423	intron	80	6.1
CLIP2.020423_2	CLIP2.020423	intron	80	6.1
CLIP2.023391_1	CLIP2.023391	CDS	80	6.1
CLIP2.023391_2	CLIP2.023391	CDS	80	6.1
CLIP2.037165_1	CLIP2.037165	CDS	80	6.1
CLIP2.037165_2	CLIP2.037165	CDS	80	6.1
CLIP2.040472_1	CLIP2.040472	intron	80	6.1
CLIP2.040472_2	CLIP2.040472	intron	80	6.1
CLIP2.043438_1	CLIP2.043438	intron	80	6.1
CLIP2.043438_2	CLIP2.043438	intron	80	6.1
LMJ.RY0402.076719_1	LMJ.RY0402.076719	intron	73	5.5
LMJ.RY0402.084491_1	LMJ.RY0402.084491	intron	73	5.5
LMJ.RY0402.103240_1	LMJ.RY0402.103240	3'UTR	73	5.5
LMJ.RY0402.158155_1	LMJ.RY0402.158155	CDS	95	5.5
LMJ.RY0402.158155_2	LMJ.RY0402.158155	CDS	95	5.5
LMJ.RY0402.209517_1	LMJ.RY0402.209517	CDS	73	5.5
LMJ.RY0402.235082_1	LMJ.RY0402.235082	intron	73	5.5
LMJ.RY0402.235629_2	LMJ.RY0402.235629	intron	58	5.5
LMJ.RY0402.237815_1	LMJ.RY0402.237815	CDS	73	5.5
LMJ.RY0402.240874_1	LMJ.RY0402.240874	CDS	95	5.5
LMJ.RY0402.240874_2	LMJ.RY0402.240874	CDS	95	5.5

Gene Annotations

PFAM:	PF00454, PF02260
PANTHER:	PTHR11139 PTHR11139:SF72
KEGG_ec:	EC:2.7.11.1
KEGG_orthology:	K04728
KOG:
Gene ontology terms::	GO:0005515, GO:0016773
Best arabidopsis TAIR name:	AT3G48190.1
Best arabidopsis TAIR symbol:	ATATM,ATM
Best arabidopsis TAIR defline:	ataxia-telangiectasia mutated
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Bleomycin sulfate, screen 1 of 2 ( 85% confidence (FDR = 0.15))

Bleomycin sulfate, screen 2 of 2 ( 99% confidence (FDR = 1.7e-08))

Zeocin, screen 1 of 5 ( 99% confidence (FDR = 7.2e-05))

Zeocin, screen 2 of 5 ( 99% confidence (FDR = 0.0061))

Zeocin, screen 3 of 5 ( 99% confidence (FDR = 1.8e-07))

Zeocin, screen 4 of 5 ( 99% confidence (FDR = 1.6e-05))

Zeocin, screen 5 of 5 ( 99% confidence (FDR = 1e-10))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.