Common name: | |
Defline: | |
Description: | |
Synonyms: | g13884.t1,Cre13.g564350.t1.1, g13884.t2 |
Chromosome: | chromosome_13 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
---|---|---|---|---|
LMJ.RY0402.076719_1 | LMJ.RY0402.076719 | sense | intron | 73 |
LMJ.RY0402.084491_1 | LMJ.RY0402.084491 | antisense | intron | 73 |
LMJ.RY0402.103240_1 | LMJ.RY0402.103240 | antisense | 3'UTR | 73 |
LMJ.RY0402.158155_1 | LMJ.RY0402.158155 | antisense | CDS | 95 |
LMJ.RY0402.158155_2 | LMJ.RY0402.158155 | sense | CDS | 95 |
LMJ.RY0402.209517_1 | LMJ.RY0402.209517 | sense | CDS | 73 |
LMJ.RY0402.235082_1 | LMJ.RY0402.235082 | sense | intron | 73 |
LMJ.RY0402.235629_2 | LMJ.RY0402.235629 | sense | intron | 58 |
LMJ.RY0402.237815_1 | LMJ.RY0402.237815 | antisense | CDS | 73 |
LMJ.RY0402.240874_1 | LMJ.RY0402.240874 | sense | CDS | 95 |
LMJ.RY0402.240874_2 | LMJ.RY0402.240874 | sense | CDS | 95 |
PFAM: | PF02260, PF00454 |
PANTHER: | PTHR11139:SF3 PTHR11139 |
KEGG_ec: | 2.7.11.1 |
KEGG_orthology: | K04728 |
KOG: | |
Gene ontology terms:: | GO:0004674, GO:0005515, GO:0016773, GO:0005515, GO:0004674, GO:00167 |
Best arabidopsis TAIR name: | AT3G48190.1 |
Best arabidopsis TAIR symbol: | ATATM,ATM |
Best arabidopsis TAIR defline: | ataxia-telangiectasia mutated |
Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
Bleomycin sulfate, screen 1 of 2 ( 85% confidence (FDR = 0.15)) |
Bleomycin sulfate, screen 2 of 2 ( 99% confidence (FDR = 1.7e-08)) |
Zeocin, screen 1 of 5 ( 99% confidence (FDR = 7.2e-05)) |
Zeocin, screen 2 of 5 ( 99% confidence (FDR = 0.0061)) |
Zeocin, screen 3 of 5 ( 99% confidence (FDR = 1.8e-07)) |
Zeocin, screen 4 of 5 ( 99% confidence (FDR = 1.6e-05)) |
Zeocin, screen 5 of 5 ( 99% confidence (FDR = 1e-10)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.