Gene: Cre13.g564350 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g13884.t1,Cre13.g564350.t1.1, g13884.t2
Chromosome:chromosome_13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.076719_1 LMJ.RY0402.076719 sense intron 73
LMJ.RY0402.084491_1 LMJ.RY0402.084491 antisense intron 73
LMJ.RY0402.103240_1 LMJ.RY0402.103240 antisense 3'UTR 73
LMJ.RY0402.158155_1 LMJ.RY0402.158155 antisense CDS 95
LMJ.RY0402.158155_2 LMJ.RY0402.158155 sense CDS 95
LMJ.RY0402.209517_1 LMJ.RY0402.209517 sense CDS 73
LMJ.RY0402.235082_1 LMJ.RY0402.235082 sense intron 73
LMJ.RY0402.235629_2 LMJ.RY0402.235629 sense intron 58
LMJ.RY0402.237815_1 LMJ.RY0402.237815 antisense CDS 73
LMJ.RY0402.240874_1 LMJ.RY0402.240874 sense CDS 95
LMJ.RY0402.240874_2 LMJ.RY0402.240874 sense CDS 95

Gene Annotations

PFAM:PF02260, PF00454
PANTHER: PTHR11139:SF3 PTHR11139
KEGG_ec:2.7.11.1
KEGG_orthology:K04728
KOG:
Gene ontology terms::GO:0004674, GO:0005515, GO:0016773, GO:0005515, GO:0004674, GO:00167
Best arabidopsis TAIR name:AT3G48190.1
Best arabidopsis TAIR symbol:ATATM,ATM
Best arabidopsis TAIR defline:ataxia-telangiectasia mutated
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Bleomycin sulfate, screen 1 of 2 ( 85% confidence (FDR = 0.15))
Bleomycin sulfate, screen 2 of 2 ( 99% confidence (FDR = 1.7e-08))
Zeocin, screen 1 of 5 ( 99% confidence (FDR = 7.2e-05))
Zeocin, screen 2 of 5 ( 99% confidence (FDR = 0.0061))
Zeocin, screen 3 of 5 ( 99% confidence (FDR = 1.8e-07))
Zeocin, screen 4 of 5 ( 99% confidence (FDR = 1.6e-05))
Zeocin, screen 5 of 5 ( 99% confidence (FDR = 1e-10))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.