Insertion junction: CLIP2.043513_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043513
Chromosome:chromosome 16
Location:5457641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCGAGAACGGGAAGGCGCCTGCGTGTGTGCGCGCGCGTGTATTGCAC
Internal bar code:ATATCATAGAGGCCGTTACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTTGTGACCATGCGCT
Suggested primer 2:CGCATGGGAAGCACGAAAAA