Insertion junction: CLIP2.043614_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043614
Chromosome:chromosome 5
Location:1874327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235750 MSH6 DNA mismatch repair protein, MutS homolog; (1 of 1) K08737 - DNA mismatch repair protein MSH6 (MSH6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATCGCCCCGTGCAGCCCCGCAACCTTCCAACCCAAGATGCCGCCCAT
Internal bar code:CGAACCTGACACCTCATCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCTCTCCTCCCTACCT
Suggested primer 2:TCCTCCCCCGTTACTACTGG