Gene: Cre05.g235750

Overview

Common name:	MSH6
Defline:	DNA mismatch repair protein, MutS homolog; (1 of 1) K08737 - DNA mismatch repair protein MSH6 (MSH6)
Description:	Orthologous to MSH6 (AT4G02070) in Arabidopsis thaliana; Likely functions in mismatch repair (MMR); In other systems, MSH6 interacts with MSH2 to repair GT mismatches and short insertion/deletion mismatches
Synonyms:	g5420.t1,MSH6,Cre05.g235750.t1.1
Chromosome:	chromosome 5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.022348_1	CLIP2.022348	intron	80	6.1
CLIP2.022348_2	CLIP2.022348	intron	80	6.1
CLIP2.031733_1	CLIP2.031733	intron	80	6.1
CLIP2.031733_2	CLIP2.031733	intron	80	6.1
CLIP2.032305_1	CLIP2.032305	intron	80	6.1
CLIP2.032305_2	CLIP2.032305	intron	80	6.1
CLIP2.037950_1	CLIP2.037950	CDS	80	6.1
CLIP2.037950_2	CLIP2.037950	CDS	80	6.1
CLIP2.043614_1	CLIP2.043614	intron	80	6.1
CLIP2.043614_2	CLIP2.043614	intron	80	6.1
LMJ.RY0402.055475_1	LMJ.RY0402.055475	intron	73	5.5
LMJ.RY0402.069841_1	LMJ.RY0402.069841	intron	95	5.5
LMJ.RY0402.069841_2	LMJ.RY0402.069841	intron	95	5.5
LMJ.RY0402.080926_1	LMJ.RY0402.080926	intron	73	5.5
LMJ.RY0402.082987_1	LMJ.RY0402.082987	3'UTR	95	5.5
LMJ.RY0402.082987_2	LMJ.RY0402.082987	intron	95	5.5
LMJ.RY0402.165878_1	LMJ.RY0402.165878	intron	73	5.5
LMJ.RY0402.174040_1	LMJ.RY0402.174040	CDS	58	5.5
LMJ.RY0402.174040_2	LMJ.RY0402.174040	CDS	73	5.5
LMJ.RY0402.179764_1	LMJ.RY0402.179764	intron	58	5.5
LMJ.RY0402.197093_1	LMJ.RY0402.197093	intron	58	5.5
LMJ.RY0402.197093_2	LMJ.RY0402.197093	intron	58	5.5
LMJ.RY0402.198619_1	LMJ.RY0402.198619	intron	95	5.5
LMJ.RY0402.198619_2	LMJ.RY0402.198619	intron	95	5.5
LMJ.RY0402.221491_1	LMJ.RY0402.221491	intron	73	5.5
LMJ.RY0402.232471_1	LMJ.RY0402.232471	intron	73	5.5
LMJ.RY0402.255584_1	LMJ.RY0402.255584	intron	73	5.5

Gene Annotations

PFAM:	PF00488, PF01624, PF05188, PF05190, PF05192
PANTHER:	PTHR11361 PTHR11361:SF31
KEGG_ec:
KEGG_orthology:	K08737
KOG:
Gene ontology terms::	GO:0005524, GO:0006298, GO:0030983
Best arabidopsis TAIR name:	AT4G02070
Best arabidopsis TAIR symbol:	ATMSH6,MSH6,MSH6-1
Best arabidopsis TAIR defline:	MUTS homolog 6
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.