Insertion junction: LMJ.RY0402.082987_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082987
Chromosome:chromosome 5
Location:2501884
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g235750 MSH6 DNA mismatch repair protein, MutS homolog; (1 of 1) K08737 - DNA mismatch repair protein MSH6 (MSH6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGACAACATATGACGCAGGGGTGTATC
Internal bar code:GCATACCGGGTTATCACATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:99.5381
LEAP-Seq n confirming:1724
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACACACTCCCGCATTTC
Suggested primer 2:ATGGTGTTGCTCCTTTACCG