Insertion junction: CLIP2.044009_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044009
Chromosome:chromosome 14
Location:513792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611300 COP3,CHR1,CSOA (1 of 7) PF01036 - Bacteriorhodopsin-like protein (Bac_rhodopsin); Channelrhodopsin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAAAGATGAGGGCAAGAGGGTAGAGGTGGGTGACATGCAGGTTCGCA
Internal bar code:GTGGAGGAGCGAAGCTTTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCTTGAACAGGAAAGA
Suggested primer 2:CAAACCCTGCCGTCACAAAG